Regulation of Gene Expression in the Brain
Regulation of gene expression is one molecular mechanism that would be expected to lead to relatively stable changes within neurons. According to this scheme, repeated exposure to stress, by causing repeated perturbation of intracellular signaling pathways, would lead eventually to changes in nuclear function and to altered rates of transcription of particular target genes. Altered expression of these genes would lead to altered activity of the neurons in which those changes occur and, ultimately, to changes in the neural circuits in which those neurons operate. The result would be stable changes in behavior.
The rate of expression of a particular gene is controlled by its location within nucleosomes and by the activity of the cell’s transcriptional machinery. A nucleosome is a tightly wound span of DNA that is bound to histones and other nuclear proteins. Transcription of a gene requires the unwinding of a nucleosome, which makes the gene accessible to a transcription complex. This complex is comprised of RNA polymerase (which transcribes the new RNA strand) and numerous regulatory proteins (some of which unwind nucleosomes via histone acetyl transferase activity). Transcription factors are proteins that bind to specific sites (response elements; also called promoter or enhancer elements) present within the regulatory regions of certain genes and thereby increase or decrease the rate at which those genes are transcribed. Transcription factors act by enhancing (or inhibiting) the activity of the transcription complex, in some cases by altering nucleosomal structure through changes in histone acetyl transferase or histone deacetylase activity of the complex.
Regulation of transcription factors is the best-understood mechanism by which changes in gene expression occur in the adult brain. Most transcription factors are regulated by phosphorylation. Accordingly, repeated exposure to a drug of abuse, by causing repeated perturbation of synaptic transmission and hence of protein kinases or protein phosphatases, would lead eventually to changes in the phosphorylation state of particular transcription factors. This would lead to altered expression of target genes for these transcription factors. Among such target genes are those for additional transcriptional factors, which—via alterations in their levels—would alter the expression of still additional target genes and so on. Stress could conceivably produce stable changes in gene expression via regulation of many other types of nuclear proteins, but such actions are just now being explored for the first time. Two transcription factors of great interest to this PPG are CREB and ∆FosB.
The brain contains roughly 100 billion nerve cells (or neurons), with each neuron forming connections (called synapses) with up to thousands of other neurons. The specificity of this staggering number of synaptic connections underlies all aspects of brain function and illustrates the remarkable complexity of the brain.